Contact:
biomiblab@bme.gatech.edu
Tel: (404) 385-5059
Fax: (404) 894-4243
Directions
Book Chapters
  1. Cheng C and Wang MD. “Healthcare data mining, association rule mining, and applications.” In: Xu D, Wang MD, Zhou F, Cai Y, editors. Health Informatics Data Analysis: Methods and Examples. Springer; 2014. In Press.
  2. Kaddi CD and Wang MD. “Computational methods for mass spectrometry imaging: challenges, progress, and opportunities.” In: Xu D, Wang MD, Zhou F, Cai Y, editors. Health Informatics Data Analysis: Methods and Examples. Springer; 2014. In Press.
  3. Kothari S, Hoffman RA,and Wang MD. “Biomedical imaging informatics for diagnostic imaging marker selection.” In: Xu D, Wang MD, Zhou F, Cai Y, editors. Health Informatics Data Analysis: Methods and Examples. Springer; 2014. In Press.
  4. Quo CF and Wang MD. “Incorporating problem-based learning (PBL) in medical image processing education.” In: Transform Science: Computational Education for Scientists. Microsoft Research; 2009. p. 176-94.
  5. Wang MD, Simons JW, and Nie SM. “Cancer nanotechnology for molecular profiling and individualized therapy.” In: Leyland-Jones B, editor. Pharmacogenetics of Breast Cancer: Towards the Individualization of Therapy. 1st ed. Informa Healthcare; 2008 May 1. p.143-56.
  6. Agrawal A, Wang MD, and Nie SM. “Bioconjugated nanoparticles for ultrasensitive detection of molecular biomarkers and infectious agents.” In: Gonsalves K, Halberstadt C, Laurencin CT, and Nair LS, editors. Biomedical Nanostructures. Hoboken, NJ: John Wiley & Sons, Inc.; 2007 Apr 11. p. 205-20.
  7. Schmelz EM, Wang MD, Merrill AH. “Genomics, proteomics, metabolomics and systems biology approach to nutrition.” In: Bowman BA and Russell RM, editors. Present Knowledge in Nutrition. 9th ed. Washington, DC, USA: ILSI Press; 2006. p. 3-19.
  8. Phan JH, Quo CF, and Wang MD. “Functional genomics and proteomics in the clinical neurosciences: data mining and bioinformatics.” Prog Brain Res (Editors: Scott E. Hemby and Sabine Bahn). 2006; 158: 83-108. Elsevier BV, Amsterdam.
  9. Hong JY, Allegood JC, Kelly S, Wang E, Merrill AH, and Wang MD. "Computer visualization models for the de novo sphingolipid biosynthetic pathway." In: Hirabayashi B, Igarashi Y, Merrill AH, editors. Sphingolipid Biology. Tokyo, Japan: Springer-Verlag; 2006. p. 493-508.
  10. Moffitt RA and Wang MD. “Microarray data analysis.” In: Akay M, editor. Wiley Encyclopedia of Biomedical Engineering. John Wiley & Sons, Inc.; 2006 Apr 14. p. 2270-9.
Journal Articles
  1. Su Z and The Sequencing Quality Control Consortium (SEQC/MAQC-III) (Wang MD, Phan JH, and Wu PY are contributing authors).“A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control consortium.” Nat Biotechnol. In Press.
  2. Li S, Zumbo P, Kreil D, Labaj P, Shi W, Shi L, Phan JH, Wu PY, Wang MD, Wang C, Thierry-Mieg D, Thierry-Mieg J, and Mason C. “Detecting and ameliorating systematic variation from large-scale RNA sequencing.” Nat Biotechnol. In Press.
  3. Wu PY, Chandramohan R, Phan JH, Mahle WT, Gaynor JW, Maher KO, and Wang MD. “Cardiovascular transcriptomics and epigenomics using next-generation sequencing: challenges, progress, and opportunities.” Circulation: Cardiovascular Genetics. In Press.
  4. Kothari S, Phan JH, Stokes TH, Osunkoya AO, Young AN, and Wang MD. “Removing batch effects from histopathological images for enhanced cancer diagnosis.” IEEE J Biomed Health Inform. 2014 May; 18(3):765-72.
  5. Phan JH, Young AN, and Wang MD.“omniBiomarker: a web-based application for knowledge-driven biomarker identification.” IEEE Trans Biomed Eng. 2013 Dec; 60(12): 3364-7.
  6. Cheng C, Chanani N, Venugopalan J, Maher K, and Wang MD. “icuARM – An ICU clinical decision support system using association rule mining.” IEEE J Trans Eng Health Med. 2013 Nov 21; 1: 4400110.
  7. Wu PY, Phan JH, and Wang MD. “Assessing the impact of human genome annotation choice on RNA-Seq expression estimates.” BMC Bioinformatics. 2013 Nov 4; 14(Suppl 11):S8.
  8. Kaddi CD, Parry RM, and Wang MD. “Multivariate hypergeometric similarity measure.” IEEE/ACM Trans Comput Biol Bioinformatics. 2013 Nov; 10(6):1505-16.
  9. Kothari S, Phan JH, Stokes TH, and Wang MD. “Pathology imaging informatics for quantitative analysis of whole-slide images.” J Am Med Inform Assoc. 2013 Aug 19; 20:1099-108.
  10. Kothari S, Phan JH, and Wang MD. “Eliminating tissue-fold artifacts in histopathological whole-slide images for improved image-based prediction of cancer-grade.” J Pathol Inform. 2013 Aug 31; 4:23.
  11. Kaddi CD, Phan JH, and Wang MD. “Computational nanomedicine: modeling of nanoparticle-mediated hyperthermal cancer therapy.” Nanomedicine. 2013 Aug; 8(8): 1323-1333.
  12. Zhang H, Wu PY,Ma M, Ye Y,Hao Y, Yang J, Yin S, Sun C, Phan JH, Wang MD, and Xi J. “An integrative approach for the large-scale identification of human genome kinases regulating cancer metastasis.” Nanomedicine: Nanotechnology, Biology, and Medicine. 2013 Aug; 9(6): 732-9.
  13. Kothari S, Phan JH, Young AN, and Wang MD. “Histological image classification using biologically interpretable shape-based features.” BMC Med Imaging. 2013 Mar 13; 13:9.
  14. Kairdolf BA, Smith AM, Stokes TH, Wang MD, Young AN, and Nie S. “Semiconductor quantum dots for bioimaging and biodiagnostic applications.” Annu Rev Anal Chem. 2013 Mar 12; 6:143-62.
  15. Parry RM, Galhena AS, Gamage CM, Bennett RV, *Wang MD, and *Fernandez FM (co-corresponding senior authors). “OmniSpect: An open MATLAB-based tool for visualization and analysis of matrix-assisted laser desorption/ionization and desorption electrospray ionization mass spectrometry images.” J Am Soc Mass Spectrom. 2013 Feb 26; 1-4.
  16. Parry RM and Wang MD. “A fast least-squares algorithm for population inference in GWAS.” BMC Bioinformatics. 2013 Jan 23; 14: 28.
  17. Phan JH, Quo CF, Cheng C, and Wang MD. “Multiscale integration of molecular, imaging, and clinical data in biomedical informatics.” IEEE Rev Biomed Eng. 2012 Dec 10; 5: 74-87.
  18. Phan JH, Young AN, and Wang MD.“Robust microarray meta-analysis identifies differentially expressed genes for clinical prediction.” Scientific World Journal, Bioinformatics and Biomedical Informatics. 2012 Nov 28; 2012: 989637.
  19. Andras TD, Alexander TS, Gahlena A, Parry RM, Fernandez FM, Kubanek J, Wang MD, and Hay ME. “Seaweed allelopathy against coral: surface distribution of a seaweed secondary metabolite by imaging mass spectrometry.” J Chem Ecol. 2012 Oct; 38(10): 1203-14.
  20. Kong KY, Marcus AI, Giaanakakou P, and Wang MD. “Integrating image analysis algorithms in a web interface for the quantification of microtubule dynamics.” Int J Comput Biol Drug Des. 2012 Sep; 5(3-4): 298-313.
  21. Phan JH, Quo CF, and Wang MD. “Cardiovascular genomics: a biomarker identification pipeline.” IEEE Trans Inf Technol Biomed. 2012 Sep; 16(5): 809-22.
  22. Quo CF, Kaddi C, Phan JH, Zollanvari A, Xu M, *Wang MD, and *Alterovitz G (co-corresponding senior authors). “Reverse engineering biomolecular systems using –omics data: challenges, progress, and opportunities.” Brief Bioinformatics. 2012 Jul; 13(4): 430-45.
  23. Freimuth RR, Freund ET, Schick L, Sharma MK, Stafford GA Suzek BE, Hernandez J, Hipp J, Kelley J, Rokicki K, Pan S, Buckler A, Stokes TH, Fernandez A, Fore I, Beutow K, Klemm J. “Life sciences domain analysis model.” J Am Med Inform Assoc. 2012 Jun 28; 19(6): 1095-1102.
  24. Parry RM, Phan JH, and Wang MD. “Win percentage: a novel measure for assessing the suitability of machine classifiers for biological problems.” BMC Bioinformatics. 2012 Mar 21; 13(Suppl 3): S7.
  25. Sharma Y, Moffitt RA, Stokes TH, Chaudry Q, and Wang MD. “Feasibility analysis of high resolution tissue image registration using 3-D synthetic data.” J Pathol Inform. 2012 Jan 19; 2: 6.
  26. Moffitt RA, Yin-Goen Q, Stokes TH, Parry RM, Torrance JH, Phan JH, Young AN, and Wang MD. “caCORRECT2: improving accuracy and reliability of microarray data in the presence of artifacts.” BMC Bioinformatics. 2011 Sep 29; 12:383.
  27. Thomas DG, Klaessig F, Harper SL, Fritts M, Hoover MD, Gaheen S, Stokes TH, Reznik-Zellen R, Freund ET, Klemm JD, Paik DS, and Baker NA. “Informatics and standards for nanomedicine technology.” Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2011 Jun 30; 3(5):511-32.
  28. Quo CF, Moffitt RA, Merrill AH, and Wang MD. “Adaptive control model reveals systematic feedback and key molecules in metabolic pathway regulation.” J Comput Biol. 2011 Feb; 18(2):169-82.
  29. Singhal S, Nie SM, and Wang MD. “Nanotechnology applications in surgical oncology.” Annu Rev Med. 2010 Aug 2. 61: 359-73.
  30. Parry RM*, Jones W*, Stokes TH* (equal contributing authors), Phan JH, Moffitt RA, Fang H, Shi L, Oberthuer A, Fischer M, Tong W, and Wang MD. “K-nearest neighbors (KNN) models for microarray gene-expression analysis and clinical outcome prediction.” Pharmacogenomics J. 2010 Aug; 10(4): 292-309. Nat Biotechnol Supplement. 2010 Oct; S62-S79.
  31. Shi L and The Microarray Quality Control Consortium (MAQC-II) (Wang MD, Phan JH, Stokes TH, Parry RM, and Moffitt RA are contributing authors).“The MAQC-II Project: A comprehensive study of common practices for the development and validation of microarray-based predictive models.” Nat Biotechnol. 2010 Aug; 28(8): 827-38.
  32. Liu J, Lau SK, Varma VA, Moffitt RA, Caldwell M, Liu T, Young AN, Petros JA, Osunkoya AO, Krogstad T, Leyland-Jones B, Wang MD, and Nie SM. “Molecular mapping of tumor heterogeneity on clinical tissue specimens with multiplexed quantum dots.” ACS Nano. 2010 Apr 8; 4(5): 2755-65.
  33. Smith AM, Wen MM, Wang MD, and Nie SM. “Size-minimized quantum dots for molecular and cellular imaging.” Single Molecule Spectroscopy in Chemistry, Physics, and Biology. 2010; 96(4): 187-201.
  34. Osunkoya AO, Yin-Goen Q, Phan JH, Moffitt RA, Stokes TH, Wang MD, and Young AN. “Diagnostic biomarkers for renal cell carcinoma: selection using novel bioinformatics systems for microarray data analysis.” Hum Pathol. 2009 Dec; 40(12): 1671-8.
  35. Phan JH, Moffitt RA, Stokes TH, Liu J, Young AN, *Nie SM, and *Wang MD (co-corresponding senior authors). “Convergence of biomarkers, bioinformatics and nanotechnology for individualized cancer treatment.” Trends Biotechnol. 2009 Jun; 27(6): 350-8.
  36. Nyadong L, Harris GA, Belayssac S, Galhena AS,  Malet-Martino M, Martino R, Parry RM, Wang MD, *Fernandez FM, and *Gilard V (co-corresponding senior authors). “Combining two-dimensional diffusion-ordered nuclear magnetic resonance spectroscopy, imaging desorption electrospray ionization mass spectrometry and direct analysis in real time mass spectrometry for the integral investigation of counterfeit pharmaceuticals.” Anal Chem. 2009 May 19; 81(12): 4803-12.
  37. Lane AL, Nyadong L, Galhena A, Stout EP, Parry RM, Wang MD, Hay ME, Fernandez FM, and Kubanek J. “Desorption electrospray ionization mass spectrometry reveals surface-mediated antifungal chemical defense of a tropical seaweed.” Proc Natl Acad Sci USA. 2009 May 5; 106(18): 7314-9.
  38. Merrill AH, Stokes TH, Momin A, Park H, Portz BJ, Kelly S, Wang E, Sullards MC, and Wang MD. “Sphingolipidomics: a valuable tool for understanding the roles of sphingolipids in biology and disease.” J Lipid Res. 2009 Apr; 50(Suppl): S97-S102.
  39. Chaudry Q, Raza SH, Young AN, and Wang MD. “Automated renal cell carcinoma subtype classification using morphological, textural and wavelets based features.” J Signal Process Syst. 2008 Jun 21; 55:15-23.
  40. Quo CF and Wang MD. “Quantitative analysis of numerical solvers for oscillatory biomolecular system models.” BMC Bioinformatics. 2008 May 28; 9(Suppl 6):S17.
  41. Stokes TH, Torrance J, Li H, and Wang MD. “ArrayWiki:an enabling technology for sharing public microarray data repositories and meta-analyses.” BMC Bioinformatics. 2008 May 28; 9(Suppl 6): S18.
  42. Agrawal A., Deo R, Wang G, *Wang MD, and *Nie SM (co-corresponding senior authors). “Nanometer-scale mapping and single molecule detection with color-coded nanoparticle probes.” Proc Natl Acad Sci USA. 2008 Mar 4; 105(9): 3298-303.
  43. Qian X, Peng XH, Ansari DO, Yin-Goen Q, Chen GZ, Shin DM, Yang L, Young AN, Wang MD, and Nie SM. “In vivo tumor targeting and spectroscopic detection with surface-enhanced Raman nanoparticle tags.” Nat Biotechnol. 2008 Jan; 26(1): 83-90.
  44. Young AN, Master VA, Paner GP, Wang MD, and Amin MB. “Renal epithelial neoplasms: diagnostic applications of gene expression profiling.” Adv Anat Pathol. 2008 Jan; 15(1): 28-38.
  45. Merrill AH, Wang MD, Park M, and Sullards MC. “(Glyco)sphingolipidology: an amazing challenge and opportunity for systems biology.” Trends Biochem Sci. 2007 Oct; 32(10): 457-68.
  46. *Wang MD, *Simons JW, and *Nie SM (co-corresponding senior authors). “Biomedical nanotechnology with bioinformatics–the promise and current progress.” Proc IEEE. 2007 Jul; 95(7): 1386-9.
  47. *Stokes TH, *Moffitt RA (equal contributing authors), Phan JH, and Wang MD. chip artifact CORRECTion (caCORRECT): A bioinformatics system for quality assurance of genomics and proteomics array data.” Ann Biomed Eng. 2007 Jun; 35(6): 1068-80.
  48. Wang MD, Shin DM, Simons JW, and Nie SM. “Nanotechnology for targeted cancer therapy.” Expert Rev Anticancer Ther. 2007 Jun; 7(6): 833-7.
  49. Xing Y, Chaudry Q, Shen C, Kong KY, Zhau HE, Chung LW, Petros JA, O’Regan RM, Yezhelyev MV, Simons JW, *Wang MD, and *Nie SM (co-corresponding senior authors). “Bioconjugated quantum dots for multiplexed and quantitative immunohistochemistry.” Nat Protoc. 2007 May 3; 2(5):1152-65.
  50. Young AN, Dale J, Yin-Goen Q, Harris WB, Petros JA, Datta MW, Wang MD, Marshall FF, Amin MB. “Current trends in molecular classification of adult renal tumors.” Urology. 2006 May; 67(5):873-80.
  51. Yin-Goen Q, Dale J, Yang WL, Phan JH, Moffitt RA, Petros JA, Datta MW, Amin MB, Wang MD, and Young AN. “Advances in molecular classification of renal neoplasms.” Histol Histopathol. 2006 Mar; 21(3): 325-39.
  52. *Wang MD, *Simons JW, and *Nie SM (co-corresponding senior authors). “Nanotechnology in personalized and predictive oncology.” US Oncol. 2006; 1(2): 92-5.
  53. *Pardo SJ, *Patel MJ (equal contributing authors), Sykes MC, Platt MO, Boyd NO, Sorescu GP, Xu M, van Loon JJ, Wang MD, and Jo H. “Simulated microgravity using the random positioning machine inhibits differentiation and alters gene expression profiles of 2T3 pre-osteoblasts.” Am J Physiol Cell Physiol. 2005 Jun; 288(6): C1211-21.
  54. Zeeberg BR, Feng W, Wang G, Wang MD, Fojo AT, Sunshine M, Narasimhan S, Kane DW, Reinhold WC, Lababidi S, Bussey KJ, Riss J, Barrett JC, and Weinstein JN. “GoMiner: a resource for biological interpretation of genomic and proteomic data.” Genome Biol. 2003 Mar 25; 4(4): R28.
Peer-Reviewed Conference Proceedings
  1. Cheng C, Chanani N, Maher K, and Wang MD. "icuARM-II: improving the reliability of personalized risk prediction in pediatric intensive care units." ACM Conference on Bioinformatics, Computational Biology and Biomedicine, ACM-BCB. Newport Beach, CA, USA. 2014 Sep 20; In Press.
  2. Phan JH, Kothari S, and Wang MD. "omniClassifier: a desktop grid computing system for Big Data prediction modeling." ACM Conference on Bioinformatics, Computational Biology and Biomedicine, ACM-BCB. Newport Beach, CA, USA. 2014 Sep 20; In Press.
  3. Venugopalan J, Cheng C, and Wang MD. "MotionTalk: personalized home rehabilitation system for assisting patients with impared mobility." ACM Conference on Bioinformatics, Computational Biology and Biomedicine, ACM-BCB. Newport Beach, CA, USA. 2014 Sep 20; In Press.
  4. Champion A, Lu G, Walker M, Kothari S, Osunkoya AO, and Wang MD. "Semantic interpretation of robust imaging features for Fuhrman grading of renal carcinoma." Conf Proc IEEE Eng Med Biol Soc, EMBC. Chicago, IL, USA. 2014 Aug 26; In Press.
  5. Harati S, Phan JH, and Wang MD. “Investigation of factors affecting RNA-seq gene expression calls.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Chicago, IL, USA. 2014 Aug 26; In Press.
  6. Hoffman RA, Kothari S, and Wang MD. "Comparison of normalization algorithms for cross-batch color segmentation of histopathological images." Conf Proc IEEE Eng Med Biol Soc, EMBC. Chicago, IL, USA. 2014 Aug 26; In Press.
  7. Kaddi CD and Wang MD. "Meta-analysis reveals informative gene signatures in head and neck cancer." Conf Proc IEEE Eng Med Biol Soc, EMBC. Chicago, IL, USA. 2014 Aug 26; In Press.
  8. Ren JC, Venugopalan J, Xu J, Kairdolf B, Durfee R, and Wang MD. "Multi-channel LED light source for fluorescent agent aided minimally invasive surgery." Conf Proc IEEE Eng Med Biol Soc, EMBC. Chicago, IL, USA. 2014 Aug 26; In Press.
  9. Sarkari S, Kaddi CD, Bennett RV, Fernandez FM, and Wang MD. "Comparison of clustering pipelines for the analysis of mass spectrometry imaging data." Conf Proc IEEE Eng Med Biol Soc, EMBC. Chicago, IL, USA. 2014 Aug 26; In Press.
  10. Zachariah N, Kothari S, Ramamurthy S, Osunkoya AO, and Wang MD. "Evaluation of performance metrics for histopathological image classifier optimization." Conf Proc IEEE Eng Med Biol Soc, EMBC. Chicago, IL, USA. 2014 Aug 26; In Press.
  11. Wu PY, Phan JH, Wang MD. “An approach for assessing RNA-seq quantification algorithms in replication studies.” Conf Proc IEEE Int Workshop Genomic Signal Process Stat, GENSIPS. Houston, TX, USA. 2013 Nov 17; 15-8.
  12. Cheng C, Martin GS, Wu PY, and Wang MD. “PHARM - Association Rule Mining for Predictive Health." IFMBE International Conference on Health Informatics, IFMBE-ICHI. Vilamoura, Portugal. 2013 Nov 7; 42: 114-7.
  13. Hoffman RA, Kothari S, Phan JH, and Wang MD. “A high-resolution tile-based approach for classifying biological regions in whole-slide histopathological images.” IFMBE International Conference on Health Informatics, IFMBE-ICHI. Vilamoura, Portugal. 2013 Nov 7; 42: 280-3.
  14. Chandramohan R, Wu PY, Phan JH and Wang MD. “Systematic assessment of RNA-seq quantification tools using simulated sequence data.” ACM Conference on Bioinformatics, Computational Biology and Biomedicine, ACM-BCB. Washington, DC, USA. 2013 Sep 22; 623-32.
  15. Cheng C, Burns T, and Wang MD. “Mining association rules for neurobehavioral and motor disorders in children diagnosed with cerebral palsy.” IEEE Int Conf Healthcare Inform, ICHI. Philadelphia, PA, USA. 2013 Sep 9; 258-63.
  16. *Poruthoor A, *Phan JH (equal contributing authors), Kothari S, and Wang MD. “Exploration of genomic, proteomic, and histopathological image data integration methods for clinical prediction.” IEEE China SIP. Beijing, China. 2013 Jul 6; 259-63.
  17. Chandramohan R, Wu PY, Phan JH, and Wang MD. “Benchmarking RNA-Seq quantification tools.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Osaka, Japan. 2013 Jul 3; 647-50.
  18. Cheng C, Brown C, Cohen L, Venugopalan J, Stokes TH, and Wang MD. “iACT - An interactive mHealth monitoring system to enhance psychotherapy for adolescencets with sickle cell disease.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Osaka, Japan. 2013 Jul 3; 2279-81.
  19. Hubbard EN, Stokes TH, Kairdolf BA, Tran J, and Wang MD. “Unmixing of spectrally similar quantum dots using filter selection.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Osaka, Japan. 2013 Jul 3; 3012-5.
  20. Stokes TH, Venugopalan J, Hubbard EN, and Wang MD. “A pilot biomedical engineering course in rapid prototyping for mobile health. “ Conf Proc IEEE Eng Med Biol Soc, EMBC. Osaka, Japan. 2013 Jul 3; 2515-8.
  21. Venugopalan J, Cheng C, Stokes TH, and Wang MD. “Kinect-based rehabilitation system for patients with traumatic brain injury.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Osaka, Japan. 2013 Jul 3; 4625-8.
  22. Kaddi CD and Wang MD. “Mathematical model of the effect of inter-cellular cooperative interactions in cancer during drug therapy.” Biomedical Science and Engineering Conference, BSEC. Oak Ridge, TN, USA. 2013 May 21; 1-4.
  23. Kells K, Kong KY, White WB, Kaddi CD, and Wang MD. “LED light source for fluorescence endoscopy using quantum dots.” Proc IEEE EMBS Point-of-Care Healthcare Technologies, POCHT. Bangalore, India. 2013 Jan 16; 9-12.
  24. Phan JH, Wu PY,and Wang MD. “Improving the flexibility of RNA-seq data analysis pipelines.” Conf Proc IEEE Int Workshop Genomic Signal Process Stat, GENSIPS. Washington, DC, USA. 2012 Dec 2; 70-3.
  25. Kaddi CD, Parry RM, and Wang MD. “Multivariate hypergeometric similarity measure.” ACM Conference on Bioinformatics, Computational Biology and Biomedicine, ACM-BCB. Orlando, FL, USA. 2012 Oct 7; 234-41.
  26. Kothari S, Phan JH, Osunkoya AO, and Wang MD. “Biological interpretation of morphological patterns in histopathological whole-slide images.” ACM Conference on Bioinformatics, Computational Biology and Biomedicine, ACM-BCB. Orlando, FL, USA. 2012 Oct 7; 218-25.
  27. Wu PY, Phan JH, and Wang MD. “The effect of human genome annotation complexity on RNA-seq gene expression quantification.” Conf Proc IEEE Bioinform Biomed Workshops, BIBMW. Philadelphia, PA, USA. 2012 Oct 4; 712-7.
  28. Kothari S, Phan JH, and Wang MD. “Scale normalization of histopathological images for batch invariant cancer diagnostic models.” Conf Proc IEEE Eng Med Biol Soc, EMBC. San Diego, CA, USA. 2012 Aug 28; 4406-9.
  29. Tran JK, Hubbard EN, Stokes TH, Moffitt RA, and Wang MD. “Feasibility of multiplex quantum dot stain using primary antibodies from four distinct host animals.” Conf Proc IEEE Eng Med Biol Soc, EMBC. San Diego, CA, USA. 2012 Aug 28; 6576-9.
  30. Venugopalan J, Brown C, Cheng C, Stokes TH, and Wang MD. “Activity and school attendance monitoring system for adolescents with sickle cell disease.” Conf Proc IEEE Eng Med Biol Soc, EMBC. San Diego, CA, USA. 2012 Aug 28; 2456-9.
  31. Chaudry Q, Sharma Y, Raza SH, and Wang MD. “Development of a novel 2D color map for interactive segmentation of histological images.” Conf Proc IEEE Int Symp Biomed Imaging, ISBI. Barcelona, Spain. 2012 May 2; 178-81.
  32. Cheng C,Brown C, New T, Stokes TH, Dampier C, and Wang MD. “SickleREMOTE: A two-way text messaging system for pediatric sickle cell disease patients.” Conf Proc IEEE EMBS Biomed Health Inform, BHI. Shenzhen, China. 2012 Jan 5; 408-11.
  33. Kaddi CD, Parry RM, and Wang MD. “Hypergeometric similarity measure for spatial analysis in tissue imaging mass spectrometry.” Conf Proc IEEE Bioinform Biomed, BIBM. Atlanta, GA, USA. 2011 Nov 12; 604-7.
  34. Kong KY, Marcus AI, Giannakakou P, and Wang MD. “A web interface for the quantification of microtubule dynamics.” Conf Proc IEEE Bioinform Biomed Workshops, BIBMW. Atlanta, GA, USA. 2011 Nov 12; 209-14.
  35. Kothari S, Phan JH, Young AN, and Wang MD. “Histological image feature mining reveals emergent diagnostic properties for renal cancer.” Conf Proc IEEE Bioinform Biomed, BIBM. Atlanta, GA, USA. 2011 Nov 12; 422-5.
  36. Quo CF and Wang MD. “Biological interpretation of model-reference adaptive control in a mass action kinetics metabolic pathway model.” Conf Proc IEEE Bioinform Biomed, BIBM. Atlanta, GA, USA. 2011 Nov 12; 265-8.
  37. Wu PY, Phan JH, Zhou F, and Wang MD. “Evaluation of normalization methods for RNA-seq gene expression estimation.” Conf Proc IEEE Bioinform Biomed Workshops, BIBMW. Atlanta, GA, USA. 2011 Nov 12; 50-7.
  38. Pierrot Al, Pujol EE, Sharma Y, and Wang MD. “Autonomous point-based registration of prostate gland tissue images.” Proc Int Conf Biomed Eng Inform, BMEI. Shanghai, China. 2011 Oct 15; 165-9.
  39. Raza SH, Parry RM, Moffitt RA, Young AN, and Wang MD. “An analysis of scale and rotation invariance in the bag-of-features method for histopathological image classification.” Med Image Comput Comput Assist Interv, MICCAI. Toronto, Canada. 2011 Sep 18; 14(pt 3): 66-74.
  40. Cheng C, Stokes TH, and Wang MD. “caREMOTE: The design of a cancer reporting and monitoring telemedicine system for domestic care.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Boston, MA, USA. 2011 Aug 30; 3168-71.
  41. Wu PY, Phan JH, and Wang MD. “Exploring the feasibility of next-generation sequencing and microarray data meta-analysis.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Boston, MA, USA. 2011 Aug 30; 7618-21.
  42. Parry RM, Phan JH, and Wang MD. “Win percentage: a novel measure for assessing the suitability of machine classifiers for biological problems.” ACM Conference on Bioinformatics, Computational Biology and Biomedicine, ACM-BCB. Chicago, IL, USA. 2011 Aug 1; 29-38.
  43. Kaddi CD, Quo CF, and Wang MD. “Analytical comparison of informatics criteria for systems biology model selection.” International Symposium on Bioinformatics Research and Applications, ISBRA. Changsha, Hunan, China. 2011 May 27; 15-8.
  44. Kothari S, Phan JH, Moffitt RA, Stokes TH, Hassberger SE, Chaudry Q, Young AN, and Wang MD. “Automatic batch-invariant color segmentation of histological cancer images.” Conf Proc IEEE Int Symp Biomed Imaging, ISBI. Chicago, IL, USA. 2011 Mar 30; 657-60.
  45. Cheng C, Stokes TH, Hang S, and Wang MD. “TissueWikiMobile: an integrative protein expression image browser for pathological knowledge sharing and annotation on a mobile device.” Conf Proc IEEE Bioinform Biomed, BIBM. Hong Kong, China. 2010 Dec 18;473-80.
  46. Srimani JK, Wu PY, Phan JH, and Wang MD. “A distributed system for fast alignment of next-generation sequencing data.” Conf Proc IEEE Bioinform Biomed Workshops, BIBMW. Hong Kong, China. 2010 Dec 18; 579-84.
  47. Quo CF, Moffitt RA, Merrill AH, and Wang MD. “Adaptive control model reveals systematic feedback and key molecules in metabolic pathway regulation.” International Conference on Research in Computational Molecular Biology, RECOMB. New York, NY, USA. 2010 Nov 16; 169-82.
  48. Malavé M, Zhao X, Kong KY, Marcus AI,and Wang MD. “Automatic tip selection for microtubule dynamics quantification.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Buenos Aires, Argentina. 2010 Aug 31;3142-5.
  49. Srimani JK, Moffitt RA,and Wang MD. “WebPK, a web-based tool for custom pharmacokinetic simulation.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Buenos Aires, Argentina. 2010 Aug 31; 1494-7.
  50. Raza SH, Parry RM, Sharma Y, Chaudry Q, Moffitt RA, Young AN, and Wang MD. “Automated classification of renal cell carcinoma subtypes using bag-of-features.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Buenos Aires, Argentina. 2010 Aug 30; 6749-52.
  51. Sharma Y, Raza SH, Kong KY, Chaudry Q, Muller S, Chen ZG, and Wang MD. “Improving classification of head and neck squamous cell carcinoma using knowledge based features.” Microscopic Image Analysis with Applications in Biology, MIAAB. Bethesda, MD, USA. 2009 Sep 3.
  52. Chaudry Q, Raza SH, Lee J, Xu Y, Wulkan M, and Wang MD. “Development of a high resolution 3D infant stomach model for surgical planning.” International Conference on Computer Analysis of Images and Patterns, CAIP. Munster, Germany. 2009 Sep 2; 614-21.
  53. Kothari S, Chaudry Q, and Wang MD. “Extraction of informative cell features by segmentation of densely clustered tissue images.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Minneapolis, MN, USA. 2009 Sep 2; 6706-9.
  54. Moffitt RA, Caldwell M, Liu T, Liu J, Nie SM and Wang MD. “Quality control of highly multiplexed proteomic immunostaining with quantum dots: correction for crosstalk.” Conf Proc IEEE Eng Med Biol Soc, EMBC.  Minneapolis, MN, USA. 2009 Sep 2; 6739-42.
  55. Parry RM, Galhena A, Fernandex F, and Wang MD. “Deblurring molecular images using desorption electrospray ionization mass spectrometry.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Minneapolis, MN, USA. 2009 Sep 2; 6731-4.
  56. Phan JH, Yin-Goen Q, Young AN, and Wang MD. “Emerging translational bioinformatics: knowledge-guided biomarker identification for cancer diagnostics.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Minneapolis, MN, USA. 2009 Sep 2; 4162-6.
  57. Raza SH, Sharma Y, Chaudry Q, Young AN, and Wang MD. “Automated classification of renal cell carcinoma subtypes using scale invariant feature transform.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Minneapolis, MN, USA. 2009 Sep 2; 6687-90.
  58. Sanders TH, Stokes TH, Moffitt RA, Chaudry Q, Parry RM, and Wang MD. “Development of an automatic quantification method for cancer tissue microarray study.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Minneapolis, MN, USA. 2009 Sep 2; 3665-8.
  59. Stokes TH and Wang MD. “SimpleVisGrid: grid Services for visualization of diverse biomedical knowledge and molecular systems data.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Minneapolis, MN, USA. 2009 Sep 2; 4178-81.
  60. Kothari S, Chaudry Q, and Wang MD. “Automated cell counting and cluster segmentation using concavity detection and ellipse fitting techniques.” Conf Proc IEEE Int Symp Biomed Imaging, ISBI. Boston, MA, USA. 2009 Jun 28; 795-8.
  61. Phan JH, Yin-Goen Q, *Young AN, and *Wang MD (co-corresponding senior authors). “Improving the efficiency of biomarker identification using biological knowledge.” Pac Symp Biocomput, PSB. Kona, HI, USA. 2009 Jan 5; 14: 427-38.
  62. Phan JH, Moffitt RA, Barrett AB, and Wang MD. “Improving microarray sample size using bootstrap data combination.” International Multi-Symposiums on Computer and Computational Sciences, IMSCCS. Shanghai, China. 2008 Oct 18; 37-44.
  63. Chaudry Q, Raza SH, Sharma Y, Young AN, and Wang MD. “Improving renal cell carcinoma classification by automatic region of interest selection.” Conf Proc IEEE Bioinform Bioeng, BIBE. Athens, Greece. 2008 Oct 8; 1-6.
  64. Kong KY, Sharma Y, Raza SH, Chen Z, Muller S, and Wang MD. “Using spiral intensity profile to quantify head and neck cancer.”Conf Proc IEEE Bioinform Bioeng, BIBE. Greece. 2008 Oct 8; 1-6.
  65. Siy PW, Moffitt RA, Parry RM, Chen YF, Liu Y, Sullards MC, Merrill AH, and Wang MD. “Matrix factorization techniques for analysis of imaging mass spectrometry data.”Conf Proc IEEE Bioinform Bioeng, BIBE. Athens, Greece. 2008 Oct 8; 1-6.
  66. Barrett AB, Phan JH, and Wang MD. “Combining multiple microarray studies using bootstrap meta-analysis. Conf Proc IEEE Eng Med Biol Soc, EMBC. Vancouver, BC, Canada. 2008 Aug 20; 5660-3.
  67. Caldwell M, Moffitt RA, Liu J, Parry RM, Sharma Y, and Wang MD. “Simple quantification of multiplexed quantum dot staining in clinical tissue samples.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Vancouver, BC, Canada. 2008 Aug 20; 1907-10.
  68. Fox B, Moffitt RA, and Wang MD. “An agent-based stochastic tumor model for predicting mitotic arrest drug response.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Vancouver, BC, Canada. 2008 Aug 20; 5458-61.
  69. Kaddi CD, Quo CF, and Wang MD. “Quantitative metrics for bio-modeling algorithm selection.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Vancouver, BC, Canada. 2008 Aug 20; 4613-6.
  70. Kapoor S, Quo CF, Merrill AH, and Wang MD. “An interactive visualization tool and data model for experimental design in systems biology.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Vancouver, BC, Canada. 2008 Aug 20; 2423-6.
  71. Sharma Y, Raza SH, Kong KY, Chaudry Q, Young AN, Chen GZ, Wang MD. “PASuite: a preprocessing algorithm suite for cellular and molecular image classification in cancer diagnosis and treatment.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Vancouver, BC, Canada. 2008 Aug 20; 3114-7.
  72. Torrance JH, Moffitt RA, Stokes TH, and Wang MD. “Can we trust biomarkers? Visualization and quantification of outlier probes in high density oligonucleotide microarrays.” IEEE/NIH Life Sci Syst Appl Workshop, LISSA. Bethesda, MD, USA. 2007 Nov 8; 196-9.
  73. Alberti C, Villareal JP, Delano B, Kong KY, Marcus AI, Giannakakou P, and Wang MD. “Microtubule dynamics classification using a statistical model of the movement of outer tips.” Conf Proc IEEE Bioinform Bioeng, BIBE. Boston, MA, USA. 2007 Oct 14; 495-502.
  74. *Freedenberg M, *Kaddi CD (equal contributing authors), Quo CF, and Wang MD. “Review of systems biology simulation tools for translational research.” Conf Proc IEEE Bioinform Bioeng, BIBE. Boston, MA, USA. 2007 Oct 14; 358-65.
  75. *Muir ER, *Ndiour IJ, *Le Goasduff NA (equal contributing authors), Moffitt RA, Liu Y, Sullards MC, Merrill AH, *Chen Y, and *Wang MD (co-corresponding senior authors). “Multivariate analysis of imaging mass spectrometry data.” Conf Proc IEEE Bioinform Bioeng, BIBE. Boston, MA, USA. 2007 Oct 14; 472-9.
  76. Phan JH and Wang MD. "Estimating classification error to identify biomarkers in time series expression data.” Conf Proc IEEE Bioinform Bioeng, BIBE. Boston, MA, USA. 2007 Oct 14; 172-9.
  77. Phan JH, Moffitt RA, Stokes TH, and Wang MD. “Evolving biological behavior in gene-based cellular simulations.” Conf Proc IEEE Bioinform Bioeng, BIBE. Boston, MA, USA. 2007 Oct 14; 509-16.
  78. Waheed S, Moffitt RA, Chaudry Q, Young AN, and Wang MD. “Computer-aided histopathological classification of cancer subtypes.” Conf Proc IEEE Bioinform Bioeng, BIBE. Boston, MA, USA. 2007 Oct 14; 503-8.
  79. Kong KY, Marcus AI, Giannakakou P, and Wang MD. “Using particle filter to track and model microtubule dynamics.” Proc IEEE Int Conf Image Proc, ICIP. San Antonio, TX, USA. 2007 Sep 16; 5: 517-20.
  80. Dhingra S, Freedenberg M, Quo CF, Merrill AH, and Wang MD. “Computational modeling of a metabolic pathway in ceramide de novo synthesis.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Lyon, France. 2007 Aug 23; 1405-8.
  81. Huynh KNT, Phan JH, Vo TM, and Wang MD. “Improved bolstering error estimation for gene ranking.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Lyon, France. 2007 Aug 23; 4633-6.
  82. Kaddi CD, Oden E, Quo CF, and Wang MD. “Exploration of quantitative scoring metrics to compare systems biology modeling approaches.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Lyon, France. 2007 Aug 23; 1121-4.
  83. Shah N, Moffitt RA, and Wang MD. “Modified genetic algorithm for parameter selection of compartmental models.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Lyon, France. 2007 Aug 23; 143-6.
  84. Stokes TH, Han X, Moffitt RA, and Wang MD. “Extending microarray quality control and analysis algorithms to illumina chip platform.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Lyon, France. 2007 Aug 23; 4637-40.
  85. Vo TM, Phan JH, Huynh KN, and Wang MD. “Reproducibility of differential gene detection across multiple microarray studies.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Lyon, France. 2007 Aug 23; 4231-4.
  86. Quo CF and Wang MD. “Quantitative comparison of numerical solvers for models of oscillatory biochemical systems.” International Multi-Symposiums on Computer and Computational Sciences, IMSCCS. Iowa City, IA, USA.  2007 Aug 13; 44-51.
  87. Stokes TH, Torrance JH, LeGoasduff N, Li H, and Wang MD. “ArrayWiki: unleashing the power of microarray data from non-collaborative public repositories.” International Multi-Symposiums on Computer and Computational Sciences, IMSCCS.Iowa City, IA, USA.2007 Aug 13; 92-9.
  88. Chaudry Q, Kong KY, Ahearn TU, Cohen V, Bostick RM, and Wang MD. “An integrated image quantification system for colorectal cancer assessment using quantum dots and molecular profiling.” Conf Proc IEEE Int Symp Biomed Imaging, ISBI. Washington, DC, USA. 2007 Apr 12; 1280-3.
  89. KongKY, Marcus AI, Hong JY, GiannakakouP,and Wang MD. “Cellular imaging data analysis: microtubule dynamics in living cell.” Proc IEEE Int Conf Image Proc, ICIP. New York, NY, USA. 2006 Oct 8; 155-8.
  90. Bostick RM, Kong KY, Ahearn TU, Chaudry Q, Cohen V, and Wang MD. “Detecting and quantifying biomarkers of risk for colorectal cancer using quantum dots and novel image analysis algorithms.” Conf Proc IEEE Eng Med Biol Soc, EMBC. New York, NY, USA. 2006 Aug 30; 3313-6.
  91. Kong KY, Marcus AI, Hong JY, Giannakakou P, and Wang MD. “Automatic microtubule tracking for QD-based cell imaging and drug efficacy study.” Conf Proc IEEE Eng Med Biol Soc, EMBC. New York, NY, USA. 2006 Aug 30; 3321-4.
  92. Phan JH, YoungAN, and Wang MD. “Selecting clinically-driven biomarkers for cancer nanotechnology.” Conf Proc IEEE Eng Med Biol Soc, EMBC. New York, NY, USA. 2006 Aug 30; 3317-20.
  93. Stokes TH, Phan JH, Quo CF, Nie SM, and Wang MD. “Bio-nano-informatics: an integrated information management system for personalized oncology.” Conf Proc IEEE Eng Med Biol Soc, EMBC. New York, NY, USA. 2006 Aug 30; 3325-8.
  94. Feng W, Wu B, Phan JH, Dale J, Young AN, and Wang MD. “An integrated cancer biomarker information system.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Shanghai, China. 2005 Sep 1; 2851-4.
  95. Henning PA, Moffitt R, Allegood J, Wang E, *Merrill AH, and *Wang MD (co-corresponding senior authors). “Computationally predicting rate constants in pathway models.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Shanghai, China. 2005 Sep 1; 5093-6.
  96. Kong KY, Marcus AI, Hong JY, Giannakakou P, and Wang MD. “Computer assisted analysis of microtubule dynamics in living cells.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Shanghai, China. 2005 Sep 1; 3982-5.
  97. Moffitt RA, Phan JH, Hemby S, and Wang MD. “Effect of outlier removal on gene marker selection using support vector machines.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Shanghai, China. 2005 Sep 1; 917-20.
  98. Phan JH, Moffitt RA, Dale J, Petros JA, *Young AN, and *Wang MD (co-corresponding senior authors). “Improvement of SVM algorithm for microarray analysis using intelligent parameter selection.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Shanghai, China. 2005 Sep 1; 4838-41.
  99. Quo CF, Wu B, Stokes TH, and Wang MD. “Development of a laboratory information system for cancer collaboration project.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Shanghai, China. 2005 Sep 1; 2859-62.
  100. Stokes TH, Phan JH, Feng W, Tuteja G, and Wang MD. “GAVis: a tool for visualization and control of genetic algorithms for -omic data analysis.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Shanghai, China. 2005 Sep 1; 2855-8.
  101. Wang G, Agrawal A, Nie SM, and Wang MD. “Optically encoded nanoparticles for detecting single biomolecules and viruses: rapid analysis of two-color colocalization data by high-speed computing.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Shanghai, China. 2005 Sep 1; 1739-42.
  102. Young AN, Amin MB, Petros JA, Natan MJ, Nie SM, and Wang MD. “Nanomolecular histopathology for renal tumor classification.” Conf Proc IEEE Eng Med Biol Soc, EMBC. Shanghai, China. 2005 Sep 1; 723-6.
  103. Hong JY and Wang MD. “High speed processing of biomedical images using programmable GPU.” Proc Int Conf Image Proc, ICIP. Singapore. 2004 Oct 24; 2455-8.
  104. Feng W, Henning PA, and Wang MD. “EGOMiner: a comprehensive genomics and proteomics data analysis and biological function interpretation system.” Conf Proc IEEE Eng Med Biol Soc, EMBC.San Francisco, CA, USA. 2004 Sep 1; 2809-12.
  105. Henning PA, Wang G, *Merrill AH, and *Wang MD (co-corresponding senior authors). "Dynamic pathway modeling of sphingolipid metabolism." Conf Proc IEEE Eng Med Biol Soc, EMBC.San Francisco, CA, USA. 2004 Sep 1; 2913-6.
  106. Mukewar PS, Wang G,Henning PA, Bao G, and Wang MD. “Segmentation of bionano-images for understanding cell dynamics.” Conf Proc IEEE Eng Med Biol Soc, EMBC. San Francisco, CA, USA. 2004 Sep 1; 1759-62.
  107. Phan JH, Quo CF, and Wang MD. “Comparative study of microarray data for cancer research.” Conf Proc IEEE Eng Med Biol Soc, EMBC. San Francisco, CA, USA. 2004 Sep 1; 2960-3.
  108. Mukewar PS and Wang MD. “Bionano-imaging analysis in cell behavior study.” Conf Proc IEEE Int Symp Biomed Imaging, ISBI. Arlington, VA, USA. 2004 Apr 15; 1520-4.
Conference Abstracts
  1. Nair A, Freedle K, Venkatesan S, Cheng C, and Wang MD. “Asthma Academy: comparing educational technologies for medication adherence and attitudes.” Public Health Informatics Conference, PHI. Atlanta, GA, USA. 2014 Apr 29.
  2. Cheng C, Burns TG, Nair A, and Wang MD. "Mining association rules for neurobehavioral and motor disorders in pediatric cerebral palsy." Pediatric Healthcare Innovation Conference. Atlanta, GA, USA. 2014 Apr 22.
  3. Nair A, Freedle K, Venkatesan S, Cheng C, and Wang MD. "Asthma Academy: comparing educational technologies for medication adherence and attitudes." Pediatric Healthcare Innovation Conference. Atlanta, GA, USA. 2014 Apr 22.
  4. Phan JH, Mahle WT, Wu PY, Maher K, and Wang MD. "Genomic characterization of inflammatory response and prediction of clinical outcome after infant cardiac surgery." Pediatric Healthcare Innovation Conference. Atlanta, GA, USA. 2014 Apr 22.
  5. Venkatesan S, Griffin A, Nair A, Cheng C, Osunkwo I, and Wang MD. "Towards an interactive education assistant for transition in pediatric sickle cell case." Pediatric Healthcare Innovation Conference. Atlanta, GA, USA. 2014 Apr 22.
  6. Venugopalan J, Cheng C, Hoffman RA, and Wang MD. "Time-series data analysis to predict mortality and cardiac arrest in pediatric populations." Pediatric Healthcare Innovation Conference. Atlanta, GA, USA. 2014 Apr 22.
  7. Kaddi CD and Wang MD. “Predictive models for head and neck cancer stage from genomic and proteomic data.” International Conference on Research in Computational Molecular Biology, RECOMB. Pittsburgh, PA, USA. 2014 Apr 2.
  8. Venugopalan J, Cheng C, Stokes TH, and Wang MD. “Cloud-based integrative pain management system." Wireless Health. Baltimore, MD, USA. 2013 Nov 1.
  9. Martin  SR, Cohen LL, Brown C, Cheng C, Wang MD, Dampier C, Masuda A, Griffin A, and Feinstein A. “Study of psychosocial intervention enhanced by texting for adolescents with Sickle Cell Disease.” International Forum on Pediatric Pain, IFPP. White Point Beach, Nova Scotia, Canada. 2013 Oct 3.
  10. Cheng C, Kaddi CD, Burns TG, and Wang MD. “Mining association rules for neurobehavioral and motor disorders in pediatric cerebral palsy.”  Annual Meeting of the Biomedical Engineering Society, BMES. Seattle, WA, USA. 2013 Sep 25.
  11. Kaddi CD and Wang MD. “Similarity measures for analyzing head and neck cancer gene expression data.” Annual Meeting of the Biomedical Engineering Society, BMES. Seattle, WA, USA. 2013 Sep 25.
  12. Kothari S, Phan JH, and Wang MD. “Histological image classification using biologically interpretable shape-based features.” Annual Meeting of the Biomedical Engineering Society, BMES. Seattle, WA, USA. 2013 Sep 25.
  13. Venugopalan J, Cheng C, Stokes TH, and Wang MD. “MotionTalk: Kinect-based rehabilitation system for patients with traumatic brain injury.” Annual Meeting of the Biomedical Engineering Society, BMES. Seattle, WA, USA. 2013 Sep 25.
  14. Wu PY, Phan JH, and Wang MD. “The effect of genome annotation complexity on RNA-seq gene expression estimation.” Annual Meeting of the Biomedical Engineering Society, BMES. Seattle, WA, USA. 2013 Sep 25.
  15. Kaddi CD and Wang MD. “Mathematical model of cancer treatment response in the presence of cooperative intercellular interactions." International Conference on Research in Computational Molecular Biology, RECOMB. Beijing, China. 2013 Apr 7.
  16. Cheng C, Brown C, New T, Stokes TH, Dampier C, and Wang MD. “SickleREMOTE: A two-way text messaging system for pediatric sickle cell disease.” ACM HotMobile. Jekyll Island, GA, USA. 2013 Feb 26.
  17. Kaddi CD and Wang MD. “Mathematical model of cancer progression and treatment response in the presence of cooperative intercellular interactions.” Georgia Tech Research and Innovation Conference, GTRIC. 2013.
  18. Cheng C, Brown C, New T, Stokes TH, Dampier C, and Wang MD. “SickleREMOTE: A two-way text messaging system for pediatric sickle cell disease.” mHealth Summit. Washington, DC, USA. 2012 Dec 3.
  19. Chen R, Wu PY, Phan JH, and Wang MD. “MATLAB-based genome browser for gene expression visualization.” Annual Meeting of the Biomedical Engineering Society, BMES. Atlanta, GA, USA. 2012 Oct 24.
  20. Cheng C, Brown C, Stokes TH, Venugopalan J, and Wang MD. “Integrated common technologies platform to promote wellness in adolescents with sickle cell disease.” Annual Meeting of the Biomedical Engineering Society, BMES. Atlanta, GA, USA. 2012 Oct 24.
  21. Kaddi CD, Parry RM, and Wang MD. “Extension of hypergeometric similarity measure for analysis of imaging mass spectrometry data.” Annual Meeting of the Biomedical Engineering Society, BMES. Atlanta, GA, USA. 2012 Oct 24.
  22. Kothari S, Phan JH, and Wang MD. “TissueViz: an information-visualization tool for studying histopathological whole-slide images.” Annual Meeting of the Biomedical Engineering Society, BMES. Atlanta, GA, USA.0 2012 Oct 24.
  23. Meyer A, Stokes TH, Kothari S, and Wang MD. “Pathological imaging quality control: biopsy segment imaging versus whole tissue slide imaging.” Annual Meeting of the Biomedical Engineering Society, BMES. Atlanta, GA, USA. 2012 Oct 24.
  24. Poruthoor A, Kothari S, Rosenthal S, Phan JH, and Wang MD. “Integrative analysis of genomic, proteomic, and histopathological ovarian cancer data.” Annual Meeting of the Biomedical Engineering Society, BMES. Atlanta, GA, USA. 2012 Oct 24.
  25. Tran JK, Hubbard EN, Stokes TH, and Wang MD. “Effects of filter selection on unmixing of spectrally similar quantum dots.” Annual Meeting of the Biomedical Engineering Society, BMES. Atlanta, GA, USA. 2012 Oct 24.
  26. Venugopalan J, Brown C, Cheng C, Stokes TH, and Wang MD. “Activity and school attendance monitoring system for adolescents with sickle cell disease.” Annual Meeting of the Biomedical Engineering Society, BMES. Atlanta, GA, USA. 2012 Oct 24.
  27. Wu PY, Phan JH, and Wang MD. “Assessing the causes of coverage non-uniformity in next-generation sequencing data.” Annual Meeting of the Biomedical Engineering Society, BMES. Atlanta, GA, USA. 2012 Oct 24.
  28. Wu PY, Phan JH, and Wang MD. “Fast and robust biomarker identification pipeline for RNA-Seq data.” Conf Proc IEEE Eng Med Biol Soc, EMBC. San Diego, CA, USA. 2012 Aug 28.
  29. Phan JH, Wu P, and Wang MD. “Translational bioinformatics pipeline for next-generation sequencing: identifying biomarkers for clinical prediction.” AMIA Summit on Translational Bioinformatics, AMIA-TBI. San Francisco, CA, USA. 2012 Mar 19.
  30. Stokes TH, Brown C, Cheng C, Dampier C, New T, and Wang MD. “Integrated mobile health tools for monitoring of treatment and transition of adolescents with sickle cell disease.” AMIA Summit on Translational Bioinformatics, TBI. San Francisco, CA, USA. 2012 Mar 19.
  31. Stokes TH and Wang MD. “StealthVest: a Wearable, Multi-functional, Open-source Health Monitoring System.” Health Information and Management Systems Society, HIMSS. Las Vegas, NV, USA. 2012 Feb 20.
  32. Kaddi CD, Parry RM, and Wang MD. “Methods for assessing similarity in tissue imaging mass spectrometry data.” Georgia Tech Research and Innovation Conference, GTRIC. Atlanta, GA, USA. 2012.
  33. Kaddi CD, Parry RM and Wang MD. “Development of similarity measure for analysis of imaging mass spectrometry data.” Georgia Tech Graduate and Post-Doc Seminar Series, GaP. Atlanta, GA, USA. 2012.
  34. Kothari S, Phan JH, and Wang MD. “Image resolution normalization for batch-invariant histological cancer diagnostic models.” Georgia Tech Research and Innovation Conference, GTRIC. Atlanta, GA, USA. 2012.
  35. Wu PY, Phan JH, and Wang MD. “Fast and robust RNA-Seq data processing techniques for quantifying RNA expression.” IEEE Int Workshop Genomic Signal Process Stat, GENSIPS. San Antonio, TX, USA. 2011 Dec 4.
  36. Stokes TH, Poole ES, Bonafide CP, Labrique AB, Willig JH, Cheng C, and Wang MD. “Chronic Care Continuum (C3): mobile-ready life skills training for adolescents with chronic diseases.” Proceedings of the First ACM Workshop on Mobile Systems, Applications, and Services for Healthcare, mHealthSys. Seattle, WA, USA. 2011 Nov 1.
  37. Poole ES, Stokes TH, Bonafide CP, Labrique AB, Willig JH, Cheng C, and Wang MD. “Chronic Care Continuum (C3): On-the-go life skills training for young adults with chronic conditions.” Workshop on Interactive Systems in Healthcare, Annual Meeting of the American Medical Informatics Association, AMIA-WISH. Washington, DC, USA. 2011 Oct 22. 
  38. Chaudry Q, Sharma Y, Raza SH, and Wang MD. "A novel 2D color map for interactive segmentation of stained tissue images." Annual Meeting of the Biomedical Engineering Society, BMES. Hartford, CT, USA. 2011 Oct 12.
  39. Cheng C, Stokes TH, and Wang MD. “caREMOTE: A cancer reporting and monitoring telemedicine system for domestic care.” Annual Meeting of the Biomedical Engineering Society, BMES. Hartford, CT, USA. 2011 Oct 12.
  40. Kaddi CD, Parry RM, and Wang MD. “Comparison of similarity measures for colocalization studies in tissue imaging mass spectrometry.” Annual Meeting of the Biomedical Engineering Society, BMES. Hartford, CT, USA. 2011 Oct 12.
  41. Kong KY, Marcus AI, Giannakakou P, and Wang MD. “A web interface for the quantification of microtubule dynamics.” Annual Meeting of the Biomedical Engineering Society, BMES. Hartford, CT, USA. 2011 Oct 12.
  42. Kothari S, Phan JH, and Wang MD. “Biological interpretation of image biomarkers for cancer diagnosis.” Annual Meeting of the Biomedical Engineering Society, BMES. Hartford, CT, USA. 2011 Oct 12.
  43. Quo CF, Moffitt RA, Kaddi C, Merrill AH, and Wang MD. “Reverse engineering metabolic pathway regulation using a modern controls approach.” Annual Meeting of the Biomedical Engineering Society, BMES. Hartford, CT, USA. 2011 Oct 12.
  44. Raza SH, Parry RM, Young AN, and Wang MD. “An analysis of codebook construction strategies in the bag-of-features method for histopathological image classification.” Annual Meeting of the Biomedical Engineering Society, BMES. Hartford, CT, USA. 2011 Oct 12.
  45. Wu P, Phan JH, and Wang MD. “Exploring the feasibility of next-generation sequencing and microarray meta-analysis.” Annual Meeting of the Biomedical Engineering Society, BMES. Hartford, CT, USA. 2011 Oct 12.
  46. Phan JH, Wu P, and Wang MD. “Evaluation of NGS factors affecting prediction performance.” FDA Sequencing Quality Control, SEQC. Cary, NC, USA. 2011 Sep 13.
  47. Stokes TH, Moffitt RA, and Wang MD. “SecureMed-ID: memorable and private identifiers for off-site access to medical records.” ACM Conference on Bioinformatics, Computational Biology and Biomedicine, ACM-BCB. Chicago, IL, USA. 2011 Aug 1; 541-3.
  48. Kaddi CD and Wang MD. “Quantitative metrics for systems biology model building and comparison.” Georgia Tech Research and Innovation Conference, GTRIC. Atlanta, GA, USA. 2011.
  49. Kaddi CD, Quo CF, and Wang MD. “Metrics for biochemical pathway models.” International Conference on Research in Computational Molecular Biology (Satellite), RECOMB. New York, NY, USA. 2010 Nov 16.
  50. Chaudry Q, Raza SH, Sharma Y, Kothari S, Young AN, and Wang MD. “Automated renal cell carcinoma subtype classification using cellular features of elliptical models of segmented nuclear clusters.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  51. Cheng C, Stokes TH, Hang S, and Wang MD. “TissueWikiMobile: An easy way to access large-scale histology image data using iPhone.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  52. Dicks A, Parry RM, and Wang MD. “Removing population structure in genome-wide association studies using supervised methods.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  53. Fox B, Moffitt RA, and Wang MD. “Combination of top-down and bottom-up tumor modeling including chemotherapeutic drug treatment.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  54. Kaddi CD, Quo CF, and Wang MD. “Metrics for systems biology model building and comparison.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  55. Kong KY, Moffitt RA, Khan H, Marcus AI, and Wang MD. “Using simulation to study the effect of microtubule dynamics parameters categorization.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  56. Kothari S, Phan JH, Chaudry Q, Young AN, and Wang MD. “Automatic color segmentation of histological images for cancer diagnosis.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  57. Phan JH, Dale J, Quo CF, Parry RM, Stokes TH, and Wang MD. “Optimizing alignment algorithms to quantify cancer signals in next-generation sequencing data.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  58. Quo CF, Moffitt RA, Merrill AH, and Wang MD. “Control dynamics in metabolic pathway regulation.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  59. Sharma Y, Parry RM, Raza SH, Chaudry Q, Stokes TH, Wang X, Muller S, Chen ZG, and Wang MD. “Computer aided diagnosis (CAD) of squamous cell carcinoma (SCC) of head and neck (H&N).” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  60. Srimani JK, Moffitt RA, and Wang MD. “WebPK: a web-based application for custom pharmacokinetic simulations.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  61. Stokes TH, Moffitt RA, Hang S, Cheng C, and Wang MD. “EasyMed-ID: private, secure, and memorable identification of medical record data for mobile devices.” Annual Meeting of the Biomedical Engineering Society, BMES. Austin, TX, USA. 2010 Oct 6.
  62. Cheng C, Stokes TH, Sharma Y, Hang S, and Wang MD. “Adapting omniVisGrid services for mobile histology image browser.” caBIG Annual Meeting. Washington, DC, USA. 2010 Sep 13. 
  63. Parry RM, Stokes TH, Hang S, Ahrens M, and Wang MD. “OmniSpect: a caBIG silver-level certified analytical service for unmixing multispectral images.” caBIG Annual Meeting. Washington, DC, USA. 2010 Sep 13.
  64. Phan JH, Quo CF, Dale J, Srimani J, Stokes TH, Parry RM, and Wang MD. “omniBiomarker 2.0: extending a caBIG certified application for next-generation sequencing.” caBIG Annual Meeting. Washington, DC, USA. 2010 Sep 13.
  65. Stokes TH, Phan JH, Parry RM, Moffitt RA, Ahrens M, Jaybhaye C, and Wang MD. “Diagnostic biomarker discovery using caBIG grid service workflows.” AMIA Summit on Translational Bioinformatics, AMIA-TBI. San Francisco, CA, USA. 2010 Mar 10.
  66. Chaudry Q, Raza SH, Jaybhaye C, Kothari S, and Wang MD. “Analysis and quantification of QD-IHC images.” AMIA Annual Symposium. San Francisco, CA, USA. 2009 Nov 14.
  67. Phan JH, Moffitt RA, Stokes TH, and Wang MD. “omniBiomarker: a caBIG-enabled translational bioinformatics application.” AMIA Annual Symposium. San Francisco, CA, USA. 2009 Nov 14.
  68. Moffitt RA, Yin-Goen Q, Liu J, Stokes TH, Phan JH, Chaudry Q, Torrance JH, Caldwell M, Parry RM, Nie S, Young AN, and Wang MD. “Translational bioinformatics for personalized oncology: a renal cell carcinoma case study.” Microsoft eScience Workshop. Pittsburgh, PA, USA. 2009 Oct 15.
  69. Quo CF, Xu Y, and Wang MD. “Incorporating problem-based learning in medical image processing: a case study for computing-centric engineering education reform.” Microsoft eScience Workshop. Pittsburgh, PA, USA. 2009 Oct 15.
  70. Kong KY, Quo CF, Marcus AI, Giannakakou P, and Wang MD. “Using matching pursuit to decompose microtubule dynamics.” Annual Meeting of the Biomedical Engineering Society, BMES. Pittsburgh, PA, USA. 2009 Oct 7.
  71. Kothari S, Chaudry Q, and Wang MD. “Automatic segmentation of densely clustered binary nuclei mask images.” Annual Meeting of the Biomedical Engineering Society, BMES. Pittsburgh, PA, USA. 2009 Oct 7.
  72. Moffitt RA, Shah N, and Wang MD. “Kinetic rate estimation for the sphingolipid synthesis network using a genetic algorithm.” Annual Meeting of the Biomedical Engineering Society, BMES. Pittsburgh, PA, USA. 2009 Oct 7.
  73. Phan JH and Wang MD. “omniBiomarker: a caBIG-certified application for knowledge-guided biomarker identification.” Annual Meeting of the Biomedical Engineering Society, BMES. Pittsburgh, PA, USA. 2009 Oct 7.
  74. Quo CF, Moffitt RA, Merrill AH, and Wang MD. “Direct model reference adaptive control (MRAC) model of de novo sphingolipid biosynthesis pathway.” Annual Meeting of the Biomedical Engineering Society, BMES. Pittsburgh, PA, USA. 2009 Oct 7.
  75. Sharma Y, Raza SH, Kong KY, Chaudry Q, Phan JH, Muller S, Chen ZG, and Wang MD. “Quantitative evaluation of cancerous features for CAD purposes.” Annual Meeting of the Biomedical Engineering Society, BMES. Pittsburgh, PA, USA. 2009 Oct 7.
  76. Sizemore EK, Fox BM, Moffitt RA, and Wang MD. “A mesoscopic vascular model of tumor response to chemotherapeutic drug treatments.” Annual Meeting of the Biomedical Engineering Society, BMES. Pittsburgh, PA, USA. 2009 Oct 7.
  77. Stokes TH, Hang S, Sanders TH, Sharma Y, and Wang MD. “TissueWiki: an information resource for validation and morphological localization of biomarkers.” Annual Meeting of the Biomedical Engineering Society, BMES. Pittsburgh, PA, USA. 2009 Oct 7.
  78. Phan JH, Stokes TH, Parry RM, Ahrens M, and Wang MD. “Development of caBIG analytical grid services for biomarker analysis: caCORRECT and omniBiomarker.” caBIG Annual Meeting. Washington, DC, USA. 2009 Jul 20.
  79. Stokes TH, Parry RM, Jaybhaye C, Chaudry Q, Ahrens M, and Wang MD. “Adapting a Matlab-based image analysis tool into a grid-enabled analytical service.” caBIG Annual Meeting. Washington, DC, USA. 2009 Jul 20.
  80. Quo CF and Wang MD. “Community annotation in translational biomedical informatics: lessons from Wikipedia.” Pacific Symposium on Biocomputing Open Science Workshop, PSB-OSW. 2009 Jan 1.
  81. Kaddi CD, Quo CF, and Wang MD. “Developing quantitative metrics for systems biology modeling algorithm selection.” Annual Meeting of the Biomedical Engineering Society, BMES. Saint Louis, MO, USA. 2008 Oct 2.
  82. Parry RM, Moffitt RA, Siy PW, Sullards MC, Chen Y, and Wang MD. “Tissue imaging mass spectrometry.” Annual Meeting of the Biomedical Engineering Society, BMES. Saint Louis, MO, USA. 2008 Oct 2.
  83. Sharma Y, Chaudry Q, Moffitt RA, Fox B, Liu J, Nie S, and Wang MD. “3D visualization of quantum-dot stained tissue images.” Annual Meeting of the Biomedical Engineering Society, BMES. Saint Louis, MO, USA. 2008 Oct 2.
  84. Moffitt RA, Stokes TH, Torrance JH, Desai, A, and Wang MD. “caCORRECT: a suite of caBIG™ grid services for microarray quality control and assessment.” caBIG Annual Meeting. Washington, DC, USA. 2008 Jun 23.
  85. Phan JH, Krishnaiah P, and Wang MD. “omniBioMarker: a caBIG bioinformatics application for enabling personalized oncology.” caBIG Annual Meeting. Washington, DC, USA. 2008 Jun 23.
  86. Kong KY, Marcus AI, Giannakakou P, Alberti C, and Wang MD. "A two dimensional simulation of microtubule dynamics." Conf Proc IEEE EMBS Inf Technol Appl Biomed, ITAB. Shenzhen, China. 2008 May 30; 461-2.
  87. Chaudry Q, Sharma Y, Raza SH, Liu J, Yusuf A, Young AN, and Wang MD. “Q-IHC: an image analysis toolset for quantum dots and immuno-histo-chemistry images.” Frontiers of Cancer Nanotechnology Symposium. Atlanta, GA, USA. 2008 Mar 30.
  88. Raza SH, Chaudry Q, Yusuf A, Sharma Y, Waheed S, Moffitt RA, Young AN, and Wang MD. “RCC subtype classification.” Frontiers of Cancer Nanotechnology Symposium. Atlanta, GA, USA. 2008 Mar 30.
  89. Phan JH, Stokes TH, Moffitt RA, Parry RM, and Wang MD. “omniBiomarker: building predictive cancer models.” FDA MicroArray Quality Control II Meeting, MAQC-II. Rockville, MD, USA. 2008 Mar 24.
  90. Chaudry Q, Sharma Y, Kong KY, Moffitt RA, Raza SH, Fox B, Liu J, Yusuf A, Caldwell M, Siy P, Parry RM, Young AN, and Wang MD. “Molecular, cellular and tissue image analysis.” 10th Anniversary BME Celebration at Emory University. Atlanta, GA, USA. 2008 Mar 6.
  91. Phan JH, Moffitt RA, Stokes TH, Chaudry Q, Liu J, Krishnaiah P, Barrett A, Torrance J, Young AN, and Wang MD. “Translational bioinformatics for personalized oncology.” 10th Anniversary BME Celebration at Emory University. Atlanta, GA, USA. 2008 Mar 6.
  92. Liu J, Lau S, Chaudry Q, Xing Y, Shen C, Levenson R, Petros JA, Varma V, Wang MD, and Nie S. “Quantum dots for multiplexed molecular profiling of cancer cells and tissue specimens.” Conf Proc IEEE Lasers Electro Optics Soc, LEOS. Lake Buena Vista, FL, USA. 2007 Oct 21; 153-4.
  93. Alberti C, Villareal JP, Delano B, Kong KY, Marcus AI, *Giannakakou P, and *Wang MD (co-corresponding senior authors). “Microtubule dynamics synthesizer.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  94. Huynh KNT, Phan JH, and Wang MD. “Improved bolstering error estimation for gene ranking.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  95. Kaddi CD, Quo CF, and Wang MD. “Comparison of systems biology modeling approaches.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  96. Kong KY, Marcus AI, Giannakakou P, and Wang MD. “Track microtubule dynamics with particle filter.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  97. Oden E, Quo CF, and Wang MD. “Development of quantitative metrics to evaluate bio-model efficacy.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  98. Quo CF, Merrill AH, and Wang MD. “A feedback control model for small molecules and nano-particle drug studies.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  99. Stokes TH, LeGoasduff N, Li H, and Wang MD. “ArrayWiki: a community-based microarray repository featuring BioPNG compression.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  100. Stokes TH, Quo CF, and Wang MD. “nanoDRIVE: nanotherapeutic Drug Response Interactive Visualization Environment.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  101. Torrance JH, Moffitt RA, and Wang MD. “Methods for quantification and visualization of biomarker and outlier probe overlap on microarrays.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  102. Vo TM, Phan JH, and Wang MD. “Effect of normalization on reproducibility of differential gene detection.” Annual Meeting of the Biomedical Engineering Society, BMES. Los Angeles, CA, USA. 2007 Sep 26.
  103. *Freedenberg M, *Kaddi CD (equal contributing authors), Quo CF, and Wang MD. “Review of systems biology simulation tools for translational research.” International Conference on Research in Computational Molecular Biology, RECOMB. San Francisco, CA, USA. 2007 Apr 21; 21-2.
  104. Quo CF, Merrill AH, and Wang MD. “Comparative study of enzyme kinetics modeling techniques for translational research in sphingolipid therapeutics.” International Charleston Ceramide Conference, CCC. Charleston, SC, USA. 2007 Mar 7.
  105. Bostick RM, Kong KY, Ahearn TU, Chaudry Q, Cohen V, and Wang MD. “Detecting and quantifying biomarkers of risk for colorectal cancer using quantum dots and novel image analysis algorithms.” Annual Meeting of the Biomedical Engineering Society, BMES. Chicago, IL, USA. 2006 Oct 11.
  106. Kong KY and Wang MD. "Automated quantification of microtubule dynamics for drug study." Annual Meeting of the Biomedical Engineering Society, BMES. Chicago, IL, USA. 2006 Oct 11.
  107. Phan JH, Stokes TH, and Wang MD. "Combinatorial biomarker selection using an evolutionary algorithm." Annual Meeting of the Biomedical Engineering Society, BMES. Chicago, IL, USA. 2006 Oct 11.
  108. Quo CF and Wang MD. "Comparison of numerical solvers in studying complex biochemical systems." Annual Meeting of the Biomedical Engineering Society, BMES. Chicago, IL, USA. 2006 Oct 11.
  109. Stokes TH, Phan JH, Quo CF, Nie SM and Wang MD. "Bio-nano-informatics: an integrated information management system for personalized oncology." Annual Meeting of the Biomedical Engineering Society, BMES. Chicago, IL, USA. 2006 Oct 11.
  110. Agrawal A, Wang MD, and Nie S. “Imaging single DNA molecules using nanometer accurate localization of optically coded nanoparticle probes.”Annual Meeting of the Society for Molecular Imaging, SMI. Kona, HI, USA. 2006 Aug 30.
  111. Kong KY, Marcus AI, and Wang MD. "Quantifying molecular imaging of microtubules." Annual Meeting of the Society for Molecular Imaging, SMI. Kona, HI, USA. 2006 Aug 30; 5(3):429-30.
  112. Wang MD and Nie S. “Molecular imaging data management for clinical biomarker research.Annual Meeting of the Society for Molecular Imaging, SMI. Kona, HI, USA. 2006 Aug 30.
  113. Quo CF and Wang MD. "Comparison of numerical solvers to describe limit cycle behavior in a classical model of oscillatory chemical systems."  Second Scientific Meeting of the Metabolomics Society. Boston, MA, USA. 2006 Jun 24.
  114. Stokes TH, Moffitt RA, Quo CF, Phan JH, and Wang MD. “Cancer experimental protocol assessment tool: PADRE.” caBIG Annual Meeting. Arlington, VA, USA. 2006 Apr 9; 57.
  115. Ma T, Stokes TH, Moffitt RA, and Wang MD. “Development of a system for high-throughput biomarker discovery using evolutionary techniques.” International Conference on Research in Computational Molecular Biology, RECOMB. Venice, Italy. 2006 Apr 2.
  116. Quo CF, Merrill AH, and Wang MD. “An approach of intelligent parameter selection for sphingolipid pathway modeling.” International Conference on Research in Computational Molecular Biology, RECOMB. Venice, Italy. 2006 Apr 2.
  117. Moffitt RA, Phan JH, Stokes TH, and Wang MD. “A computational system for improving quality of cancer genomics and proteomics data.” Annual Meeting of the American Association for Cancer Research, AACR. Washington, DC, USA. 2006 Apr 1.
  118. Quo CF, Wu B, and Wang MD. "Development of an information management infrastructure for multi-disciplinary collaboration." Annual Meeting of the Biomedical Engineering Society, BMES. Baltimore, MD, USA. 2005 Sep 29.
  119. Henning PA, Stiles DA, Stokes TH, Wang G, Wheeler D, Sidorov I, Tan PK, Cam MC, and Wang MD. “ChipQC: microarray artifact visualization tool.” International Conference on Intelligent Systems for Molecular Biology, ISMB. Detroit, MI, USA. 2005 Jun 25.
  120. Moffitt RA, Stokes TH, Phan JH, and Wang MD. "Simple outlier removal improves the performance of support vector machines as a biomarker selection method." International Conference on Intelligent Systems for Molecular Biology, ISMB. Detroit, MI, USA. 2005 Jun 25.
  121. Phan JH, Moffitt RA, Dale J, Petros J, Young AN, and Wang MD. "Improvement of microarray analysis algorithms with intelligent parameter selection for SVM." International Conference on Intelligent Systems for Molecular Biology, ISMB. Detroit, MI, USA. 2005 Jun 25.
  122. Quo CF, Wu B, and Wang MD. “Development of information management system for bioinformatics laboratory.” International Conference on Research in Computational Molecular Biology, RECOMB. Boston, MA, USA. 2005 May 14.
  123. Feng W, Tuteja G, and Wang MD. “EGOMiner: a genomics and proteomics data computation and interpretation system for biomedical applications.” Conf Proc IEEE Comput Syst Bioinform, CSB. Palo Alto, CA, USA. 2004 Aug 16; 562-3.
  124. *Phan JH, *Quo CF (equal contributing authors), Guo K, Feng W, Wang G, and Wang MD. “Development of a knowledge-based multi-scheme cancer microarray data analysis system.” Conf Proc IEEE Comput Syst Bioinform, CSB. Palo Alto, CA, USA. 2004 Aug 16; 474-5.
  125. Henning PA, Stiles DA, Wang G, Mukewar P, Chu TY, Tan PK, Wheeler D, *Cam MC, and *Wang MD (co-corresponding senior authors). "ChipQC: microarray artifact visualization tool." International Conference on Research in Computational Molecular Biology (Satellite), RECOMB. San Diego, CA, USA. 2004 Mar 26; 186-7.
  126. Henning PA, Wang G, *Merrill AH, and *Wang MD (co-corresponding senior authors). "Dynamic pathway modeling of sphingolipid metabolism." International Conference on Research in Computational Molecular Biology (Satellite), RECOMB. San Diego, CA, USA. 2004 Mar 26; 542-3.
  127. Stiles D, Tan P, Henning PA, Wang MD, Downey T, Boysen C, and Cam M. “Contribution of alternative splice variants on gene expression measurements from three commercial microarray platforms.” Pac Symp Biocomput, PSB. Kona, HI, USA. 2004 Jan 6.
  128. Feng W, Wang G, Zeeberg BR, Guo K, Fojo AT, Kane DW, Reinhold WC, Lababidi S, Weinstein JN, and Wang MD. “Development of gene ontology tool for biological interpretation of genomic and proteomic data.” AMIA Annual Symposium. Washington, DC, USA. 2003 Nov 8; 839.
  129. Wang G and Wang MD. “Development of a biomedical imaging informatics system for diagnosis and treatment planning.” AMIA Annual Symposium. Washington, DC, USA. 2003 Nov 8; 1045.
  130. Henning PA, Tang PK, Wang MD, and Cam MC. “ChipQC: a visualization tool for DNA and protein array quality control.” NIH Research Festival. Bethesda, MD, USA. 2003 Oct 14.
  131. Guo K, Feng W, Wang G, and Wang MD. “A novel multi-scheme optimal decision making system for cancer DNA microarray data analysis.” Annual Meeting of the American Association for Cancer Research, AACR. Washington, DC, USA. 2003 Jul 11; 44: 707.
  132. Weinstein JN, Bussey KL, Zeeburg BR, Kim S, Lababidi S, Reinhold WC, Nishizuka S, Ajay, Sunshine M, Narasimhan S, Cao H, Blower P, Wang G, Feng W, Wang MD, Riss J, Barrett CJ, Kohn K, and Kane D. “Integromics: Integrating information from genomic, proteomic, and pharmacological studies.” Annual Meeting of the American Association for Cancer Research, AACR. Washington, DC, USA. 2003 Jul 11; 44: 234.
  133. Guo K, Feng W, Wang G, and Wang MD. “Molecular-based high throughput ‘omic’ data computation system for cancer diagnosis and treatment.” International Conference on Research in Computational Molecular Biology, RECOMB. Berlin, Germany. 2003 Apr 10; 353-4.
  134. Feng W, Wang G, Zeeberg BR, Guo K, Fojo AT, Sunshine M, Narasimhan S, Kane D, Reinhold WC, Lababidi S, Bussey KJ, Riss J., Barrett JC, Weinstein JN, and Wang MD. “Development of resource gene ontology tool for biological interpretation of cancer genomic and proteomic data.” 11th Annual Suddath Symposium and 2nd Annual Georgia Cancer Coalition Symposium. Atlanta, GA, USA. 2003 Mar 27.
  135. Wang G, Feng W, Patra A, Guo K, and Wang MD.Development of a biomedical imagining informatics system for tumor diagnosis and treatment planning,” 11th Annual Suddath Symposium and 2nd Annual Georgia Cancer Coalition Symposium. Atlanta, GA, USA. 2003 Mar 27.
  136. Patra A and Wang MD. “Volumetric medical image compression and reconstruction for interactive visualization in surgical planning.” Proc IEEE Data Comp Conf, DCC. Snowbird, UT, USA. 2003 Mar 5; 442.
  137. Feng W, Guo K, Wang G, and Wang MD. “Developing mass spectrometry data archiving and analysis system for cancer research.” Protein Informatics Conference. San Diego, CA, USA. 2003.
  138. Zeeberg BR, Wang G, Feng W, Wang MD, Reinhold WC, Lababidi S, Kane DW, Narasimhan S, Sunshine M, and Weinstein JN. “GoMiner: a tool for biological interpretation of microarray and other -omic data.” NIH Research Festival. Bethesda, MD, USA. 2002 Oct 15.
  139. Feng W, Wang G, Zeeberg B, Fojo T, Bussey K, Lababidi S, Kim S, Reinhold WC, Nishizuka S, Narasimhan S, Sunshine M, Kane D, Wang MD, and Weinstein JN. “The bioinformatics of microarray data: A program package for biological interpretation.” Microarray Data Analysis Conference. Washington, DC, USA. 2002 Sep 10.
  140. Feng W, Wang G, Zeeberg B, Fojo T, Bussey K, Lababidi S, Kim S, Reinhold WC, Nishizuka S, Narasimhan S, Sunshine M, Kane D, Wang MD, and Weinstein JN. “The bioinformatics of microarray data: a program package for biological interpretation.” NIH Summer Research Poster Session. Bethesda, MD, USA. 2002.